Nature Reviews Molecular Cell Biology
Volume 18, No 10 October 2017
Featured Article
Shared molecular and cellular mechanisms of premature ageing and ageing-associated diseases
Nard Kubben & Tom Misteli
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Review
Article series: Post-translational modifications
Ubiquitylation at the crossroads of development and disease
Michael Rape
Ubiquitylation is a post-translational modification that modulates protein stability and regulates various cellular signalling pathways and cellular processes, including cell differentiation, proliferation and migration. Recent insights highlight its crucial role in development and how its deregulation is associated with several diseases.
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Review
Shared molecular and cellular mechanisms of premature ageing and ageing-associated diseases
Nard Kubben & Tom Misteli
The majority of common diseases are associated with ageing. Diseases that cause premature ageing serve as natural model systems for studying the mechanisms of ageing and disease, as they share similar cellular and molecular hallmarks, including genomic instability, metabolic defects and loss of regenerative capacity.
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Review
Article series: DNA damage
The multifaceted roles of PARP1 in DNA repair and chromatin remodelling
Arnab Ray Chaudhuri & André Nussenzweig
Recent insights into the roles of poly(ADP-ribose) polymerase 1 (PARP1) in mediating various DNA repair pathways, stabilizing DNA replication and modulating chromatin structure are being exploited clinically for the treatment of DNA repair-deficient cancers.
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Review
The essential kinase ATR: ensuring faithful duplication of a challenging genome
Joshua C. Saldivar, David Cortez & Karlene A. Cimprich
Replication stress is controlled by the kinase ataxia telangiectasia and Rad3-related (ATR), which senses and resolves threats to DNA integrity. ATR activation is complex and involves a core set of components that recruit ATR to stressed replication forks, stimulate its kinase activity and amplify downstream signalling to maintain the stability of replication forks.
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Research Highlights
Journal Club: Cell organization by liquid phase separation
Daniel Gerlich discusses how a study by the Hyman laboratory introduced the theory of liquid phase separation to cell biology and its implications for the understanding of cell organization and function.
Nuclear Envelope: Chromosomes: one BAF layer to bind them all
Barrier-to-autointegration factor (BAF) forms a layer on the surface of chromatin at late mitosis, guiding the reformation of a single nuclear envelope surrounding all chromosomes.
Genome editing: CRISPR–Cas becoming more human
CRISPR–Cas9 was used in human embryos to correct a dominant heterozygous gene mutation that causes hypertrophic cardiomyopathy.
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Review
Article series: RNA processing and modifications
Splicing and transcription touch base: co-transcriptional spliceosome assembly and function
Lydia Herzel, Diana S. M. Ottoz, Tara Alpert & Karla M. Neugebauer
Pre-mRNA splicing occurs on nascent RNA, which is attached to chromatin by RNA polymerase II. Much splicing occurs co-transcriptionally, and the spatial and temporal coordination of the two processes is tightly coordinated with other mRNA-processing events.
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Article series: RNA processing and modifications
The different steps of mRNA processing and maturation are tightly co-regulated and interlinked with transcription, translation and mRNA decay. The complexity of this regulatory network is further increased by mRNA chemical modifications such as N6-methyladenosine (m6A) and 5-methylcytosine (m5C). This article series highlights our current understanding of the mechanisms that underlie the biogenesis of different RNA species, including RNA processing and chemical modification, and the importance of these processes in physiology and disease.
Collection on: The 3D genome
This collection showcases both the latest advances in the methodologies used to study genome organization and our emerging understanding of how genome organization and nuclear architecture regulate gene expression, cell fate and cell function in physiology and disease. The collection includes recent Reviews, Research articles and Protocols from across the Nature group of journals.
Focus on: DNA damage repair
DNA lesions are repaired by a plethora of cellular processes, together constituting the DNA damage response, which is crucial for the maintenance of genomic integrity. It is becoming increasingly clear that different repair pathways can crosstalk, owing to the capacity of certain proteins to function in the signalling and repair of different DNA lesions. Furthermore, DNA repair factors and pathways are intricately connected with cellular processes such as DNA replication, transcription and protein post-translational modifications.
Article series: Adult stem cells
Adult stem cells are found in the body throughout life and have a crucial role in tissue repair and in the maintenance of tissue homeostasis. Examples include blood, skin, intestine and muscle stem cells. This series of Nature Reviews Molecular Cell Biology brings together articles that discuss the identity, regulation and function of adult stem cells in different organs and tissues. The articles also highlight the importance of adult stem cells in physiology and disease and how a better understanding of their biology can be exploited to restore or improve the function of organs or tissues that are damaged by injury, ageing or pathological conditions.
Focus on: Pluripotent stem cells
To mark the 10-year anniversary of the discovery of induced pluripotent stem cells (iPSCs), this Focus looks at how research on iPSCs and embryonic stem cells (ES cells) has provided insight into the molecular basis of reprogramming, pluripotency and cell fate specification, and highlights progresses and limitations in translating stem cell research to the clinic.
Produced with support from Thermo Fisher Scientific
Focus on: Transcription
Transcription is a fundamental step in the control of gene expression, which determines cell identity and function and enables cells to respond and adapt to changing cellular environments. Recent insights into the mechanisms that regulate transcription initiation, elongation and termination by RNA polymerase II highlight the complexity of these processes, which ensure the correct implementation of gene expression programmes.
Focus on: The Extracellular Matrix
The cellular sensing and relay of chemical and mechanical cues from the extracellular matrix (ECM) influences cell morphology, movement and function, and even cell fate. Our knowledge of the structure, biochemistry, biology and physics of the ECM has increased in recent years, as has our understanding of how the dysregulation of its formation, remodelling and function can lead to diseases such as fibrosis and cancer.
Article series: Technologies and techniques
In this article series, Nature Reviews Molecular Cell Biology focuses on recent technological and technical developments and on the impact they have on diverse areas of molecular and cell biology. These articles highlight important biological issues, describe the methods and techniques that were developed to tackle them, and discuss how these developments have contributed to the understanding of fundamental biological phenomena.
Article series: DNA damage
Cells are continuously faced with endogenous and exogenous stress that can ultimately lead to DNA damage and genomic instability. In this article series, Nature Reviews Molecular Cell Biology explores the different pathways that preserve genomic integrity by detecting and repairing DNA damage in its varying forms. Together, these articles highlight the multiple levels of control that ensure an efficient DNA damage response and the implications of impaired repair pathways.
Article series: Cell death and autophagy
Homeostatic and pathological cell death can take diverse forms. One of these is autophagy, a process that can also promote cell survival by recycling cytoplasmic components to maintain cellular energy balance. In this article series, Nature Reviews Molecular Cell Biology looks at the progress that has been made in our molecular understanding of different modes of cell death and of autophagy as both a survival and death mechanism. Together, these articles highlight the physiological contexts in which these pathways are induced and the ways in which these control mechanisms interplay to decide cell fate.
Article series: Post-translational modifications series
The articles in this series will highlight the ability of different post-translational modifications to modify proteins and dynamically regulate their function in diverse cell biological contexts. We hope that together they will emphasize the insights gained into how such modifications are regulated and recognized, how they crosstalk with one another, and the cell biological processes in which post-translational modifications have emerged as an additional level of control.
More Web Focuses
Please visit our archive of Web Focuses, which are small collections of articles on a related theme. Content ranges from Research Highlights, Journal Clubs, through to Reviews and Perspectives.
More Article Series
Please visit our archive of Article Series, which are special series of articles that explore a specific theme in the field of molecular cell biology and comprises Reviews and Perspectives that are published consecutively over a period of time.
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